Vitamin Metabolism

ALPL Alkaline Phosphatase

Converts pyridoxal phosphate to pyridoxal for cellular uptake.

Chromosome
1
Variants read
1
Foods
0
Fig. 1Position of ALPL on chromosome 1 approximate, banding stylised
ALPL · rs4654748
0 Mb · p armcentromereq arm · 249 Mb
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Analyzed variants (SNPs)

How to read this: each row is one possible genotype, the two DNA letters you carry at this position, one inherited from each parent. "Normal" matches the more common version; "Carrier" (heterozygous) means you have one copy of each version, usually a partial effect; "Variant" (homozygous) means both copies carry the less common version, usually the strongest effect. The estimated frequency below is calculated from the variant's frequency in the general population (Hardy-Weinberg principle) — it is a population estimate, not a measurement of our own customers.

rs4654748 B6 Status (NBPF3 locus) Population frequency: 32.0% Chr. 1 : 15,843,647

GWAS variant near NBPF3/AGPAT1 locus consistently associated with lower plasma pyridoxal-5-phosphate (PLP) levels. PLP is the active coenzyme form of vitamin B6 required for over 100 enzymatic reactions including homocysteine metabolism.

Genotype Impact Est. frequency What it means
CCNormal Normal ~46% Normal pyridoxal-5-phosphate (PLP) plasma levels. Standard dietary B6 intake from meat, fish, and potatoes is generally sufficient.
CTCarrier Low impact ~44% Moderately reduced PLP plasma levels tendency. Slightly elevated dietary B6 needs, prioritise B6-rich foods. Consider active pyridoxal-5-phosphate (P5P) supplementation over pyridoxine.
TTVariant Moderate ~10% Consistently lower plasma vitamin B6 (PLP) levels. Higher dietary B6 requirements. Supplementation with the active P5P form is preferred over standard pyridoxine hydrochloride. Relevant interactions with MTHFR, CBS, and BHMT.

Estimated with the Hardy-Weinberg principle from the variant's population frequency, not measured directly.

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